Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 AL137783.1-201ENST00000623494 1896 ntBASIC11.02□□□□□ -0.65
SNAI2O43623 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SNAI2O43623 BEND3P3-201ENST00000611030 2440 ntBASIC11.01□□□□□ -0.65
SNAI2O43623 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 AC114271.1-201ENST00000612689 2813 ntBASIC11.01□□□□□ -0.65
SNAI2O43623 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.01□□□□□ -0.65
SNAI2O43623 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 RPL37AP1-201ENST00000412502 279 ntBASIC11.01□□□□□ -0.65
SNAI2O43623 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.01□□□□□ -0.65
SNAI2O43623 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.01□□□□□ -0.65
SNAI2O43623 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 AP000344.2-201ENST00000512987 629 ntBASIC11.01□□□□□ -0.65
SNAI2O43623 PGAM5P1-201ENST00000518923 814 ntBASIC11.01□□□□□ -0.65
SNAI2O43623 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.01□□□□□ -0.65
SNAI2O43623 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 AL512361.1-201ENST00000554200 418 ntBASIC11.01□□□□□ -0.65
SNAI2O43623 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.01□□□□□ -0.65
SNAI2O43623 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SNAI2O43623 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
SNAI2O43623 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
SNAI2O43623 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.01□□□□□ -0.65
SNAI2O43623 AP001059.3-201ENST00000619053 235 ntBASIC11.01□□□□□ -0.65
SNAI2O43623 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 AC093525.8-201ENST00000624099 1342 ntBASIC11.01□□□□□ -0.65
SNAI2O43623 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.01□□□□□ -0.65
SNAI2O43623 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SNAI2O43623 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
SNAI2O43623 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SNAI2O43623 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNAI2O43623 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 AC020910.6-201ENST00000623084 1459 ntBASIC11□□□□□ -0.65
SNAI2O43623 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms