Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP2A1O14983 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 U62317.3-201ENST00000608319 855 ntBASIC16.64■□□□□ 0.25
ATP2A1O14983 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ATP2A1O14983 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A1O14983 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP2A1O14983 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A1O14983 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ATP2A1O14983 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A1O14983 AC023157.3-201ENST00000619086 2088 ntBASIC16.63■□□□□ 0.25
ATP2A1O14983 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2A1O14983 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
ATP2A1O14983 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A1O14983 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A1O14983 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.63■□□□□ 0.25
ATP2A1O14983 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A1O14983 AL807761.2-201ENST00000422849 729 ntBASIC16.63■□□□□ 0.25
ATP2A1O14983 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A1O14983 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A1O14983 CHCHD2P9-201ENST00000461726 456 ntBASIC16.63■□□□□ 0.25
ATP2A1O14983 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A1O14983 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATP2A1O14983 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
ATP2A1O14983 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2A1O14983 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A1O14983 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2A1O14983 MIR6842-201ENST00000612539 65 ntBASIC16.63■□□□□ 0.25
ATP2A1O14983 AP003419.4-201ENST00000616071 517 ntBASIC16.63■□□□□ 0.25
ATP2A1O14983 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ATP2A1O14983 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2A1O14983 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A1O14983 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A1O14983 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A1O14983 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A1O14983 AC023824.1-201ENST00000562945 2975 ntBASIC16.62■□□□□ 0.25
ATP2A1O14983 AJ011931.1-201ENST00000618749 2492 ntBASIC16.62■□□□□ 0.25
ATP2A1O14983 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A1O14983 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A1O14983 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP2A1O14983 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 RPS9P1-201ENST00000419943 583 ntBASIC16.62■□□□□ 0.25
ATP2A1O14983 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 AC092580.1-201ENST00000433998 658 ntBASIC16.62■□□□□ 0.25
ATP2A1O14983 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.62■□□□□ 0.25
ATP2A1O14983 KRT8P1-201ENST00000557533 1207 ntBASIC16.62■□□□□ 0.25
ATP2A1O14983 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP2A1O14983 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A1O14983 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP2A1O14983 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
ATP2A1O14983 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
ATP2A1O14983 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms