Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 HCG4-201ENST00000418983 998 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 KRT16P4-201ENST00000453883 522 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC243562.2-201ENST00000561247 970 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MIR5100-201ENST00000579544 119 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AP000867.4-201ENST00000641616 219 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC006037.2-201ENST00000622975 2232 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MED24-201ENST00000356271 3446 ntTSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FCGR3A-206ENST00000443193 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MYADML-201ENST00000474610 2147 ntBASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 HCG4P8-203ENST00000443049 980 ntBASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LILRP1-201ENST00000444199 1370 ntBASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.72□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms