Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 MTHFR-210ENST00000641407 2387 ntBASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 RPL18P13-201ENST00000478088 569 ntBASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 RNA5SP423-201ENST00000517127 109 ntBASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 MIR3619-201ENST00000579667 83 ntBASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AC005324.6-201ENST00000587972 613 ntBASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AL645939.5-201ENST00000606834 243 ntBASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AL805961.1-203ENST00000641078 1258 ntBASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AC068587.8-201ENST00000641239 219 ntBASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.33□□□□□ -0.27
NPIPA2E9PIF3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.33□□□□□ -0.27
NPIPA2E9PIF3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA2E9PIF3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
NPIPA2E9PIF3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA2E9PIF3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
NPIPA2E9PIF3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA2E9PIF3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA2E9PIF3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 AL031595.1-201ENST00000623969 4709 ntBASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 FAM58BP-201ENST00000439056 645 ntBASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 AC008805.1-201ENST00000590892 364 ntBASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 AC100757.4-201ENST00000626934 759 ntBASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms