Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AL353779.1-201ENST00000434793 351 ntBASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AL662844.1-201ENST00000546340 181 ntBASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TPRKBQ9Y3C4 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 MARK2P9-201ENST00000430958 1727 ntBASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 ACTG1P14-201ENST00000446382 1122 ntBASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.36□□□□□ -0.27
TPRKBQ9Y3C4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms