Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DENND2AQ9ULE3 AC215219.1-201ENST00000400706 1817 ntBASIC17.58■□□□□ 0.4
DENND2AQ9ULE3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.58■□□□□ 0.4
DENND2AQ9ULE3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
DENND2AQ9ULE3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DENND2AQ9ULE3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DENND2AQ9ULE3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
DENND2AQ9ULE3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.58■□□□□ 0.4
DENND2AQ9ULE3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DENND2AQ9ULE3 AP002353.1-201ENST00000528257 1599 ntBASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 AL627231.1-201ENST00000394467 1125 ntBASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 DUX4L50-201ENST00000455245 715 ntBASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 MIR3677-201ENST00000578964 60 ntBASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 MIR6074-201ENST00000612054 107 ntBASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DENND2AQ9ULE3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 CAP2P1-201ENST00000557743 1390 ntBASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 KRT18P9-201ENST00000604826 1300 ntBASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 AL390755.1-201ENST00000623716 2027 ntBASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 AC026316.1-201ENST00000398900 414 ntBASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 AC092580.1-201ENST00000433998 658 ntBASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 AL161932.2-201ENST00000435436 679 ntBASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 RPSAP15-201ENST00000448168 861 ntBASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 AC022447.6-201ENST00000515522 438 ntBASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms