Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 AC010141.1-201ENST00000411585 623 ntBASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 AC079328.1-201ENST00000560358 952 ntBASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 MIR4783-201ENST00000580343 82 ntBASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 OR2I1P-210ENST00000642037 4691 ntBASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 KHSRPP1-201ENST00000427983 1768 ntBASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 AC079178.1-201ENST00000420915 656 ntBASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 MYADML-201ENST00000474610 2147 ntBASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CUEDC1Q9NWM3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms