Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 IGLL3P-201ENST00000412472 434 ntBASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 HCG4B-203ENST00000450128 991 ntBASIC11.87□□□□□ -0.51
NKX6-2Q9C056 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 PRELID1P1-202ENST00000567272 903 ntBASIC11.87□□□□□ -0.51
NKX6-2Q9C056 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AC093458.2-201ENST00000623150 629 ntBASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AC010507.1-201ENST00000633895 436 ntBASIC11.87□□□□□ -0.51
NKX6-2Q9C056 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 AC018712.1-201ENST00000455767 687 ntBASIC11.86□□□□□ -0.51
NKX6-2Q9C056 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 AL355102.3-201ENST00000554299 1678 ntBASIC11.86□□□□□ -0.51
NKX6-2Q9C056 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 PI4KAP2-201ENST00000360806 2080 ntBASIC11.86□□□□□ -0.51
NKX6-2Q9C056 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms