Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC006480.2-201ENST00000609770 1337 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC092978.1-202ENST00000637590 1327 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AL590440.2-201ENST00000641973 1595 ntBASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AC215219.1-201ENST00000400706 1817 ntBASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AC232323.1-201ENST00000540724 2099 ntBASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 RNA5SP359-201ENST00000364838 113 ntBASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AC007274.2-201ENST00000421675 662 ntBASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 SEC63P1-201ENST00000425785 1258 ntBASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AC012441.2-201ENST00000444843 739 ntBASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC4.95□□□□□ -1.62
KRTAP4-3Q9BYR4 AC090857.1-201ENST00000527400 390 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms