Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.38□□□□□ -0.11
NPAS2Q99743 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 ANKRD19P-201ENST00000338192 862 ntBASIC14.38□□□□□ -0.11
NPAS2Q99743 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NPAS2Q99743 SOCS2P1-201ENST00000417727 557 ntBASIC14.38□□□□□ -0.11
NPAS2Q99743 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.38□□□□□ -0.11
NPAS2Q99743 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.38□□□□□ -0.11
NPAS2Q99743 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.38□□□□□ -0.11
NPAS2Q99743 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.38□□□□□ -0.11
NPAS2Q99743 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
NPAS2Q99743 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 GAPDHP40-201ENST00000505218 1006 ntBASIC14.38□□□□□ -0.11
NPAS2Q99743 SLC25A47P1-201ENST00000531577 414 ntBASIC14.38□□□□□ -0.11
NPAS2Q99743 TDH-203ENST00000531764 1110 ntBASIC14.38□□□□□ -0.11
NPAS2Q99743 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NPAS2Q99743 ENPP7P5-201ENST00000541031 1031 ntBASIC14.38□□□□□ -0.11
NPAS2Q99743 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.38□□□□□ -0.11
NPAS2Q99743 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.38□□□□□ -0.11
NPAS2Q99743 AC017083.2-201ENST00000608069 979 ntBASIC14.38□□□□□ -0.11
NPAS2Q99743 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.38□□□□□ -0.11
NPAS2Q99743 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.38□□□□□ -0.11
NPAS2Q99743 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.38□□□□□ -0.11
NPAS2Q99743 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.38□□□□□ -0.11
NPAS2Q99743 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.38□□□□□ -0.11
NPAS2Q99743 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.38□□□□□ -0.11
NPAS2Q99743 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPAS2Q99743 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPAS2Q99743 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NPAS2Q99743 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPAS2Q99743 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
NPAS2Q99743 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPAS2Q99743 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
NPAS2Q99743 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 RN7SL832P-201ENST00000607781 1756 ntBASIC14.37□□□□□ -0.11
NPAS2Q99743 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
NPAS2Q99743 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.37□□□□□ -0.11
NPAS2Q99743 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.37□□□□□ -0.11
NPAS2Q99743 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 AC233724.13-201ENST00000598383 410 ntBASIC14.37□□□□□ -0.11
NPAS2Q99743 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 AC107373.2-201ENST00000607735 490 ntBASIC14.37□□□□□ -0.11
NPAS2Q99743 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPAS2Q99743 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NPAS2Q99743 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 AL158070.2-201ENST00000623713 1621 ntBASIC14.37□□□□□ -0.11
NPAS2Q99743 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.37□□□□□ -0.11
NPAS2Q99743 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPAS2Q99743 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.37□□□□□ -0.11
NPAS2Q99743 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms