Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 AL805961.2-201ENST00000642139 4817 ntBASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 HIST3H2BA-201ENST00000436555 524 ntBASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 HCG4B-203ENST00000450128 991 ntBASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 AL049840.3-201ENST00000602669 611 ntBASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 AC011481.3-201ENST00000623895 5594 ntBASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3IPQ96QF0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 MAPK10-262ENST00000641051 5738 ntBASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 AC092910.1-201ENST00000482027 1129 ntBASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 KRT8P14-201ENST00000414254 1442 ntBASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3IPQ96QF0 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms