Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 MIR1224-201ENST00000408193 85 ntBASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 SLED1-202ENST00000512051 380 ntBASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 SAMD11P1-201ENST00000571429 661 ntBASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 SLC25A6P4-201ENST00000586535 553 ntBASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AC026992.2-203ENST00000563004 2419 ntBASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AC008620.2-201ENST00000510294 1569 ntBASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AC004623.1-201ENST00000624592 2127 ntBASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 KRT8P12-202ENST00000472924 1397 ntBASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 RPL13AP23-201ENST00000480739 586 ntBASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 AL133215.2-201ENST00000609242 977 ntBASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LYSMD2Q8IV50 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.83□□□□□ -0.35
LYSMD2Q8IV50 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LYSMD2Q8IV50 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
LYSMD2Q8IV50 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
LYSMD2Q8IV50 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms