Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AL445209.1-201ENST00000607269 3491 ntBASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 MEX3B-202ENST00000558133 4333 ntBASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 RNA5SP421-201ENST00000516864 134 ntBASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 AC069120.2-201ENST00000524091 540 ntBASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 RFPL4AP1-201ENST00000530883 850 ntBASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 AC140878.1-201ENST00000565277 250 ntBASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 DUX4L47-201ENST00000566374 394 ntBASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 AC106028.4-201ENST00000614509 607 ntBASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 KHSRPP1-201ENST00000427983 1768 ntBASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ANKRD55Q3KP44 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 TUBB8P4-201ENST00000511806 1324 ntBASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ANKRD55Q3KP44 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms