Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 RN7SL375P-201ENST00000492442 298 ntBASIC20.32■□□□□ 0.84
SPHKAPQ2M3C7 AC008026.2-201ENST00000495438 348 ntBASIC20.32■□□□□ 0.84
SPHKAPQ2M3C7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SPHKAPQ2M3C7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC20.32■□□□□ 0.84
SPHKAPQ2M3C7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.32■□□□□ 0.84
SPHKAPQ2M3C7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.32■□□□□ 0.84
SPHKAPQ2M3C7 PEBP1P2-201ENST00000603980 558 ntBASIC20.32■□□□□ 0.84
SPHKAPQ2M3C7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SPHKAPQ2M3C7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SPHKAPQ2M3C7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 HNRNPA1P2-207ENST00000432375 960 ntBASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 ZNF436-AS1-201ENST00000335648 2547 ntBASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHKAPQ2M3C7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 AC092862.1-201ENST00000541534 533 ntBASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 OR7E115P-201ENST00000382617 1024 ntBASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 ACTBP14-201ENST00000411655 1089 ntBASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 DDC-204ENST00000426377 1700 ntTSL 3 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SPHKAPQ2M3C7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 AC087203.1-201ENST00000532111 1181 ntBASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHKAPQ2M3C7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms