Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RFX7Q2KHR2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 AL022313.4-201ENST00000562756 2046 ntBASIC17.46■□□□□ 0.39
RFX7Q2KHR2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 AC006480.2-201ENST00000609770 1337 ntBASIC17.46■□□□□ 0.39
RFX7Q2KHR2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 NDUFS6P1-201ENST00000485187 316 ntBASIC17.46■□□□□ 0.39
RFX7Q2KHR2 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX7Q2KHR2 TBC1D3J-201ENST00000620719 1426 ntBASIC17.46■□□□□ 0.39
RFX7Q2KHR2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 AC092978.1-202ENST00000637590 1327 ntBASIC17.45■□□□□ 0.38
RFX7Q2KHR2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 KRT8P24-201ENST00000560290 1559 ntBASIC17.45■□□□□ 0.38
RFX7Q2KHR2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 FGFR3P1-201ENST00000449999 601 ntBASIC17.45■□□□□ 0.38
RFX7Q2KHR2 MPRIPP1-201ENST00000452433 1089 ntBASIC17.45■□□□□ 0.38
RFX7Q2KHR2 RN7SL258P-201ENST00000478664 300 ntBASIC17.45■□□□□ 0.38
RFX7Q2KHR2 RN7SL67P-201ENST00000492147 296 ntBASIC17.45■□□□□ 0.38
RFX7Q2KHR2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 AL591471.1-201ENST00000621855 229 ntBASIC17.45■□□□□ 0.38
RFX7Q2KHR2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 AC092299.1-201ENST00000632679 757 ntBASIC17.45■□□□□ 0.38
RFX7Q2KHR2 AC090643.2-201ENST00000623442 2029 ntBASIC17.45■□□□□ 0.38
RFX7Q2KHR2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms