Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.43□□□□□ -0.1
CDKL1Q00532 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.43□□□□□ -0.1
CDKL1Q00532 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKL1Q00532 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 IGHV3-72-202ENST00000621503 303 ntBASIC14.43□□□□□ -0.1
CDKL1Q00532 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKL1Q00532 AC006453.4-201ENST00000636949 1252 ntBASIC14.43□□□□□ -0.1
CDKL1Q00532 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.43□□□□□ -0.1
CDKL1Q00532 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDKL1Q00532 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.42□□□□□ -0.1
CDKL1Q00532 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CDKL1Q00532 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 ARSEP1-201ENST00000420443 635 ntBASIC14.42□□□□□ -0.1
CDKL1Q00532 TMEM14DP-201ENST00000422205 345 ntBASIC14.42□□□□□ -0.1
CDKL1Q00532 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.42□□□□□ -0.1
CDKL1Q00532 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.42□□□□□ -0.1
CDKL1Q00532 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.42□□□□□ -0.1
CDKL1Q00532 KRT90P-201ENST00000549264 1064 ntBASIC14.42□□□□□ -0.1
CDKL1Q00532 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.42□□□□□ -0.1
CDKL1Q00532 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.42□□□□□ -0.1
CDKL1Q00532 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 AC019294.4-201ENST00000561777 2905 ntBASIC14.42□□□□□ -0.1
CDKL1Q00532 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDKL1Q00532 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDKL1Q00532 AC097376.2-205ENST00000610159 5334 ntBASIC14.42□□□□□ -0.1
CDKL1Q00532 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKL1Q00532 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKL1Q00532 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKL1Q00532 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.41□□□□□ -0.1
CDKL1Q00532 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.41□□□□□ -0.1
CDKL1Q00532 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKL1Q00532 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDKL1Q00532 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.41□□□□□ -0.1
CDKL1Q00532 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKL1Q00532 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.41□□□□□ -0.1
CDKL1Q00532 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKL1Q00532 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKL1Q00532 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
CDKL1Q00532 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKL1Q00532 FAM197Y7-201ENST00000432892 766 ntBASIC14.41□□□□□ -0.1
CDKL1Q00532 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.41□□□□□ -0.1
CDKL1Q00532 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.41□□□□□ -0.1
CDKL1Q00532 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKL1Q00532 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKL1Q00532 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
CDKL1Q00532 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.41□□□□□ -0.1
CDKL1Q00532 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.41□□□□□ -0.1
CDKL1Q00532 AP003171.2-201ENST00000528208 925 ntBASIC14.41□□□□□ -0.1
CDKL1Q00532 CR383656.12-201ENST00000549567 513 ntBASIC14.41□□□□□ -0.1
CDKL1Q00532 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CDKL1Q00532 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDKL1Q00532 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.41□□□□□ -0.1
CDKL1Q00532 OR10B1P-201ENST00000601666 907 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms