Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.24□□□□□ -0.13
AP1S2P56377 AC104506.1-201ENST00000609247 429 ntBASIC14.24□□□□□ -0.13
AP1S2P56377 AC244157.2-201ENST00000616239 1006 ntBASIC14.24□□□□□ -0.13
AP1S2P56377 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
AP1S2P56377 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
AP1S2P56377 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
AP1S2P56377 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.24□□□□□ -0.13
AP1S2P56377 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AP1S2P56377 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S2P56377 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
AP1S2P56377 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.23□□□□□ -0.13
AP1S2P56377 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
AP1S2P56377 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
AP1S2P56377 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AP1S2P56377 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.23□□□□□ -0.13
AP1S2P56377 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.23□□□□□ -0.13
AP1S2P56377 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 CSF2RBP1-201ENST00000447905 391 ntBASIC14.23□□□□□ -0.13
AP1S2P56377 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.23□□□□□ -0.13
AP1S2P56377 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.23□□□□□ -0.13
AP1S2P56377 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 SNX29P1-201ENST00000548357 1007 ntBASIC14.23□□□□□ -0.13
AP1S2P56377 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.23□□□□□ -0.13
AP1S2P56377 EEF1DP1-201ENST00000585891 896 ntBASIC14.23□□□□□ -0.13
AP1S2P56377 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AP1S2P56377 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.23□□□□□ -0.13
AP1S2P56377 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AP1S2P56377 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.23□□□□□ -0.13
AP1S2P56377 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
AP1S2P56377 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S2P56377 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.22□□□□□ -0.13
AP1S2P56377 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
AP1S2P56377 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.22□□□□□ -0.13
AP1S2P56377 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
AP1S2P56377 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
AP1S2P56377 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.22□□□□□ -0.13
AP1S2P56377 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.22□□□□□ -0.13
AP1S2P56377 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 HLA-V-201ENST00000429037 534 ntBASIC14.22□□□□□ -0.13
AP1S2P56377 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.22□□□□□ -0.13
AP1S2P56377 AC100850.1-201ENST00000506768 649 ntBASIC14.22□□□□□ -0.13
AP1S2P56377 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
AP1S2P56377 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.22□□□□□ -0.13
AP1S2P56377 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 AC009955.4-201ENST00000597192 544 ntBASIC14.22□□□□□ -0.13
AP1S2P56377 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 AC133552.6-201ENST00000613406 534 ntBASIC14.22□□□□□ -0.13
AP1S2P56377 MIR6775-201ENST00000617557 69 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 1568.8 ms