Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH15P55291 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH15P55291 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH15P55291 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.73□□□□□ -0.21
CDH15P55291 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH15P55291 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH15P55291 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH15P55291 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH15P55291 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH15P55291 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH15P55291 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH15P55291 AL157414.3-201ENST00000624276 1954 ntBASIC13.72□□□□□ -0.21
CDH15P55291 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.72□□□□□ -0.21
CDH15P55291 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CDH15P55291 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CDH15P55291 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.72□□□□□ -0.21
CDH15P55291 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.72□□□□□ -0.21
CDH15P55291 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.72□□□□□ -0.21
CDH15P55291 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CDH15P55291 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.72□□□□□ -0.21
CDH15P55291 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.72□□□□□ -0.21
CDH15P55291 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.72□□□□□ -0.21
CDH15P55291 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.72□□□□□ -0.21
CDH15P55291 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 AC125807.2-201ENST00000513358 3514 ntBASIC13.72□□□□□ -0.21
CDH15P55291 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CDH15P55291 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CDH15P55291 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CDH15P55291 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CDH15P55291 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH15P55291 HSPA8P5-201ENST00000456928 2069 ntBASIC13.71□□□□□ -0.21
CDH15P55291 AP000437.1-201ENST00000624057 2085 ntBASIC13.71□□□□□ -0.21
CDH15P55291 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH15P55291 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 KHSRPP1-201ENST00000427983 1768 ntBASIC13.71□□□□□ -0.21
CDH15P55291 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 NCLP1-201ENST00000445357 1963 ntBASIC13.71□□□□□ -0.21
CDH15P55291 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
CDH15P55291 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.71□□□□□ -0.21
CDH15P55291 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 AL353705.2-201ENST00000428243 662 ntBASIC13.71□□□□□ -0.21
CDH15P55291 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH15P55291 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.71□□□□□ -0.21
CDH15P55291 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.71□□□□□ -0.21
CDH15P55291 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.71□□□□□ -0.21
CDH15P55291 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH15P55291 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.71□□□□□ -0.21
CDH15P55291 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.71□□□□□ -0.21
CDH15P55291 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH15P55291 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDH15P55291 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH15P55291 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.71□□□□□ -0.21
CDH15P55291 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH15P55291 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CDH15P55291 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH15P55291 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH15P55291 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms