Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
GDNFP39905 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 BTBD7P1-201ENST00000447253 1453 ntBASIC12.81□□□□□ -0.36
GDNFP39905 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.81□□□□□ -0.36
GDNFP39905 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 MIR770-201ENST00000390219 98 ntBASIC12.81□□□□□ -0.36
GDNFP39905 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.81□□□□□ -0.36
GDNFP39905 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.81□□□□□ -0.36
GDNFP39905 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.81□□□□□ -0.36
GDNFP39905 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.81□□□□□ -0.36
GDNFP39905 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.81□□□□□ -0.36
GDNFP39905 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 AL158212.4-201ENST00000624062 1286 ntBASIC12.81□□□□□ -0.36
GDNFP39905 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 AC011840.2-201ENST00000563063 1520 ntBASIC12.81□□□□□ -0.36
GDNFP39905 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 AGAP10P-201ENST00000454844 2418 ntBASIC12.81□□□□□ -0.36
GDNFP39905 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.81□□□□□ -0.36
GDNFP39905 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.81□□□□□ -0.36
GDNFP39905 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GDNFP39905 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 PCDHA5-203ENST00000614258 4248 ntBASIC12.8□□□□□ -0.36
GDNFP39905 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 AC072061.1-201ENST00000569710 2234 ntBASIC12.8□□□□□ -0.36
GDNFP39905 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
GDNFP39905 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.8□□□□□ -0.36
GDNFP39905 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 GNAQP1-201ENST00000444815 1067 ntBASIC12.8□□□□□ -0.36
GDNFP39905 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.8□□□□□ -0.36
GDNFP39905 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 KRT18P43-201ENST00000469825 1281 ntBASIC12.8□□□□□ -0.36
GDNFP39905 TIMM17BP1-201ENST00000545713 516 ntBASIC12.8□□□□□ -0.36
GDNFP39905 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.8□□□□□ -0.36
GDNFP39905 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.8□□□□□ -0.36
GDNFP39905 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.8□□□□□ -0.36
GDNFP39905 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.8□□□□□ -0.36
GDNFP39905 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.8□□□□□ -0.36
GDNFP39905 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.8□□□□□ -0.36
GDNFP39905 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.8□□□□□ -0.36
GDNFP39905 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.8□□□□□ -0.36
GDNFP39905 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.8□□□□□ -0.36
GDNFP39905 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms