Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM23P36406 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
TRIM23P36406 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.33□□□□□ -0.11
TRIM23P36406 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM23P36406 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM23P36406 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM23P36406 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM23P36406 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.11
TRIM23P36406 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM23P36406 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.11
TRIM23P36406 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM23P36406 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM23P36406 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
TRIM23P36406 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM23P36406 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM23P36406 AL161932.2-201ENST00000435436 679 ntBASIC14.33□□□□□ -0.12
TRIM23P36406 RN7SL258P-201ENST00000478664 300 ntBASIC14.33□□□□□ -0.12
TRIM23P36406 AC022447.6-201ENST00000515522 438 ntBASIC14.33□□□□□ -0.12
TRIM23P36406 RNA5SP423-201ENST00000517127 109 ntBASIC14.33□□□□□ -0.12
TRIM23P36406 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM23P36406 MIR4754-201ENST00000582477 89 ntBASIC14.33□□□□□ -0.12
TRIM23P36406 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM23P36406 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM23P36406 AL591471.1-201ENST00000621855 229 ntBASIC14.33□□□□□ -0.12
TRIM23P36406 AC090386.2-201ENST00000623010 1039 ntBASIC14.33□□□□□ -0.12
TRIM23P36406 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM23P36406 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM23P36406 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM23P36406 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TRIM23P36406 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM23P36406 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM23P36406 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 AC023908.3-201ENST00000564211 3047 ntBASIC14.33□□□□□ -0.12
TRIM23P36406 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM23P36406 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRIM23P36406 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRIM23P36406 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM23P36406 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM23P36406 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM23P36406 CICP4-201ENST00000447359 2812 ntBASIC14.32□□□□□ -0.12
TRIM23P36406 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM23P36406 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM23P36406 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM23P36406 AC007274.2-201ENST00000421675 662 ntBASIC14.32□□□□□ -0.12
TRIM23P36406 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.32□□□□□ -0.12
TRIM23P36406 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM23P36406 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRIM23P36406 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 AC104506.1-201ENST00000609247 429 ntBASIC14.32□□□□□ -0.12
TRIM23P36406 MEG3_2.1-201ENST00000611456 105 ntBASIC14.32□□□□□ -0.12
TRIM23P36406 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM23P36406 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms