Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 AIG1-203ENST00000367596 559 ntTSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC19.97■□□□□ 0.79
CPS1P31327 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 RN7SL69P-201ENST00000468423 272 ntBASIC19.97■□□□□ 0.79
CPS1P31327 MYADML-201ENST00000474610 2147 ntBASIC19.97■□□□□ 0.79
CPS1P31327 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.97■□□□□ 0.79
CPS1P31327 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC19.97■□□□□ 0.79
CPS1P31327 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 GRAMD4P6-201ENST00000556999 244 ntBASIC19.97■□□□□ 0.79
CPS1P31327 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 MIR4265-201ENST00000582152 99 ntBASIC19.97■□□□□ 0.79
CPS1P31327 ACTBP9-201ENST00000587663 1099 ntBASIC19.97■□□□□ 0.79
CPS1P31327 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.97■□□□□ 0.79
CPS1P31327 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.97■□□□□ 0.79
CPS1P31327 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC19.97■□□□□ 0.79
CPS1P31327 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC19.97■□□□□ 0.79
CPS1P31327 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CPS1P31327 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.96■□□□□ 0.79
CPS1P31327 PDXDC2P-206ENST00000534700 1315 ntBASIC19.96■□□□□ 0.79
CPS1P31327 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC19.96■□□□□ 0.79
CPS1P31327 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPS1P31327 LILRP2-202ENST00000413572 1383 ntBASIC19.96■□□□□ 0.79
CPS1P31327 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPS1P31327 KRT8P43-201ENST00000406052 1458 ntBASIC19.95■□□□□ 0.78
CPS1P31327 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPS1P31327 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.95■□□□□ 0.78
CPS1P31327 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPS1P31327 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC19.95■□□□□ 0.78
CPS1P31327 RPSAP70-201ENST00000504462 864 ntBASIC19.95■□□□□ 0.78
CPS1P31327 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC19.95■□□□□ 0.78
CPS1P31327 RN7SL480P-201ENST00000581481 294 ntBASIC19.95■□□□□ 0.78
CPS1P31327 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC19.95■□□□□ 0.78
CPS1P31327 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC19.95■□□□□ 0.78
CPS1P31327 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC19.95■□□□□ 0.78
CPS1P31327 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.95■□□□□ 0.78
CPS1P31327 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPS1P31327 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPS1P31327 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPS1P31327 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPS1P31327 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CPS1P31327 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPS1P31327 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPS1P31327 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CPS1P31327 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CPS1P31327 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CPS1P31327 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC19.94■□□□□ 0.78
CPS1P31327 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.94■□□□□ 0.78
CPS1P31327 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.94■□□□□ 0.78
CPS1P31327 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC19.94■□□□□ 0.78
CPS1P31327 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC19.94■□□□□ 0.78
CPS1P31327 AL359092.2-201ENST00000423330 585 ntBASIC19.94■□□□□ 0.78
CPS1P31327 RPL18AP16-201ENST00000424057 531 ntBASIC19.94■□□□□ 0.78
CPS1P31327 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC19.94■□□□□ 0.78
CPS1P31327 AP000533.1-201ENST00000456143 1177 ntBASIC19.94■□□□□ 0.78
CPS1P31327 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC19.94■□□□□ 0.78
CPS1P31327 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CPS1P31327 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CPS1P31327 AP006248.1-201ENST00000610471 67 ntBASIC19.94■□□□□ 0.78
CPS1P31327 AC113385.2-201ENST00000614465 762 ntBASIC19.94■□□□□ 0.78
CPS1P31327 Z82244.2-201ENST00000632196 448 ntBASIC19.94■□□□□ 0.78
CPS1P31327 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CPS1P31327 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CPS1P31327 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CPS1P31327 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms