Protein–RNA interactions for Protein: P26358

DNMT1, DNA (cytosine-5)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 1,616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1P26358 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT1P26358 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT1P26358 TPO-203ENST00000346956 2923 ntTSL 5 BASIC21.22■□□□□ 0.99
DNMT1P26358 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT1P26358 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT1P26358 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC21.22■□□□□ 0.99
DNMT1P26358 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT1P26358 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT1P26358 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT1P26358 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
DNMT1P26358 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
DNMT1P26358 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC21.22■□□□□ 0.99
DNMT1P26358 AC226150.1-201ENST00000544259 466 ntBASIC21.22■□□□□ 0.99
DNMT1P26358 AC013553.1-201ENST00000560906 267 ntBASIC21.22■□□□□ 0.99
DNMT1P26358 RPS5-204ENST00000598098 536 ntTSL 2 BASIC21.22■□□□□ 0.99
DNMT1P26358 HMGB1P24-201ENST00000611897 328 ntBASIC21.22■□□□□ 0.99
DNMT1P26358 AC004554.1-201ENST00000422830 1468 ntBASIC21.21■□□□□ 0.99
DNMT1P26358 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
DNMT1P26358 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
DNMT1P26358 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
DNMT1P26358 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 PRSS3P1-201ENST00000503996 742 ntBASIC21.21■□□□□ 0.99
DNMT1P26358 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC21.21■□□□□ 0.99
DNMT1P26358 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
DNMT1P26358 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 GAS7-216ENST00000583882 553 ntTSL 5 BASIC21.21■□□□□ 0.99
DNMT1P26358 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 AL049840.2-201ENST00000602722 535 ntBASIC21.21■□□□□ 0.99
DNMT1P26358 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC21.21■□□□□ 0.99
DNMT1P26358 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC21.21■□□□□ 0.99
DNMT1P26358 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
DNMT1P26358 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT1P26358 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.2■□□□□ 0.99
DNMT1P26358 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 TBC1D27-202ENST00000424239 1573 ntBASIC21.2■□□□□ 0.98
DNMT1P26358 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
DNMT1P26358 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
DNMT1P26358 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 UROS-201ENST00000368774 744 ntTSL 2 BASIC21.2■□□□□ 0.98
DNMT1P26358 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC21.2■□□□□ 0.98
DNMT1P26358 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
DNMT1P26358 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 RPL35P9-201ENST00000446059 350 ntBASIC21.2■□□□□ 0.98
DNMT1P26358 GNG10P1-201ENST00000452289 199 ntBASIC21.2■□□□□ 0.98
DNMT1P26358 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC21.2■□□□□ 0.98
DNMT1P26358 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 VENTXP3-201ENST00000546480 773 ntBASIC21.2■□□□□ 0.98
DNMT1P26358 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC21.2■□□□□ 0.98
DNMT1P26358 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
DNMT1P26358 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
DNMT1P26358 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT1P26358 AL672207.1-201ENST00000328462 1570 ntBASIC21.2■□□□□ 0.98
DNMT1P26358 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 CD81-209ENST00000492627 886 ntTSL 3 BASIC21.19■□□□□ 0.98
DNMT1P26358 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC21.19■□□□□ 0.98
DNMT1P26358 AL627230.2-201ENST00000613254 655 ntBASIC21.19■□□□□ 0.98
DNMT1P26358 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DNMT1P26358 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
DNMT1P26358 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
DNMT1P26358 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC21.19■□□□□ 0.98
DNMT1P26358 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DNMT1P26358 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 AC138761.6-201ENST00000583997 1423 ntBASIC21.19■□□□□ 0.98
DNMT1P26358 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DNMT1P26358 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT1P26358 AC046158.3-201ENST00000624947 2558 ntBASIC21.18■□□□□ 0.98
DNMT1P26358 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC21.18■□□□□ 0.98
DNMT1P26358 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
DNMT1P26358 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT1P26358 HINT1-205ENST00000508488 703 ntTSL 2 BASIC21.18■□□□□ 0.98
DNMT1P26358 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
DNMT1P26358 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT1P26358 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC21.18■□□□□ 0.98
DNMT1P26358 AL139339.2-201ENST00000608063 657 ntBASIC21.18■□□□□ 0.98
DNMT1P26358 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC21.18■□□□□ 0.98
DNMT1P26358 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT1P26358 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC21.18■□□□□ 0.98
DNMT1P26358 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms