Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CHMP24386 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 CICP8-201ENST00000455800 2813 ntBASIC13.74□□□□□ -0.21
CHMP24386 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 INE2-201ENST00000630399 1874 ntBASIC13.74□□□□□ -0.21
CHMP24386 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 COL6A4P2-202ENST00000504443 2753 ntBASIC13.74□□□□□ -0.21
CHMP24386 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CHMP24386 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.74□□□□□ -0.21
CHMP24386 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
CHMP24386 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.74□□□□□ -0.21
CHMP24386 CTBP2P5-201ENST00000454986 1264 ntBASIC13.74□□□□□ -0.21
CHMP24386 FO681548.1-201ENST00000455617 1132 ntBASIC13.74□□□□□ -0.21
CHMP24386 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.74□□□□□ -0.21
CHMP24386 KRT90P-201ENST00000549264 1064 ntBASIC13.74□□□□□ -0.21
CHMP24386 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 MIR6775-201ENST00000617557 69 ntBASIC13.74□□□□□ -0.21
CHMP24386 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 AC099521.3-201ENST00000624251 2938 ntBASIC13.74□□□□□ -0.21
CHMP24386 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CHMP24386 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 AC012617.1-204ENST00000586340 2305 ntBASIC13.74□□□□□ -0.21
CHMP24386 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.74□□□□□ -0.21
CHMP24386 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CHMP24386 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHMP24386 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CHMP24386 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CHMP24386 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CHMP24386 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.73□□□□□ -0.21
CHMP24386 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CHMP24386 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CHMP24386 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CHMP24386 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 HLA-K-203ENST00000430151 1046 ntBASIC13.73□□□□□ -0.21
CHMP24386 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.73□□□□□ -0.21
CHMP24386 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 TMEM198B-204ENST00000484016 896 ntBASIC13.73□□□□□ -0.21
CHMP24386 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms