Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XPAP23025 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.78□□□□□ -0.04
XPAP23025 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.78□□□□□ -0.04
XPAP23025 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
XPAP23025 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.78□□□□□ -0.04
XPAP23025 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.78□□□□□ -0.04
XPAP23025 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.78□□□□□ -0.04
XPAP23025 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
XPAP23025 CICP14-201ENST00000629111 2732 ntBASIC14.78□□□□□ -0.04
XPAP23025 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
XPAP23025 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XPAP23025 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
XPAP23025 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
XPAP23025 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
XPAP23025 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
XPAP23025 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.77□□□□□ -0.04
XPAP23025 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
XPAP23025 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.77□□□□□ -0.04
XPAP23025 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
XPAP23025 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
XPAP23025 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
XPAP23025 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
XPAP23025 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.77□□□□□ -0.05
XPAP23025 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.77□□□□□ -0.05
XPAP23025 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.77□□□□□ -0.05
XPAP23025 RPL18P13-201ENST00000478088 569 ntBASIC14.77□□□□□ -0.05
XPAP23025 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.77□□□□□ -0.05
XPAP23025 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.77□□□□□ -0.05
XPAP23025 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.77□□□□□ -0.05
XPAP23025 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.77□□□□□ -0.05
XPAP23025 RBM8B-201ENST00000555532 525 ntBASIC14.77□□□□□ -0.05
XPAP23025 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.77□□□□□ -0.05
XPAP23025 AC005962.1-201ENST00000584100 773 ntBASIC14.77□□□□□ -0.05
XPAP23025 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.77□□□□□ -0.05
XPAP23025 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.77□□□□□ -0.05
XPAP23025 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
XPAP23025 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.77□□□□□ -0.05
XPAP23025 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
XPAP23025 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
XPAP23025 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.77□□□□□ -0.05
XPAP23025 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
XPAP23025 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.76□□□□□ -0.05
XPAP23025 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 AC009093.10-201ENST00000641956 1442 ntBASIC14.76□□□□□ -0.05
XPAP23025 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
XPAP23025 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.76□□□□□ -0.05
XPAP23025 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.76□□□□□ -0.05
XPAP23025 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
XPAP23025 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.76□□□□□ -0.05
XPAP23025 NKAIN1P1-201ENST00000435754 582 ntBASIC14.76□□□□□ -0.05
XPAP23025 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.76□□□□□ -0.05
XPAP23025 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.76□□□□□ -0.05
XPAP23025 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
XPAP23025 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.76□□□□□ -0.05
XPAP23025 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.76□□□□□ -0.05
XPAP23025 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.76□□□□□ -0.05
XPAP23025 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.76□□□□□ -0.05
XPAP23025 AC013355.1-201ENST00000562625 723 ntBASIC14.76□□□□□ -0.05
XPAP23025 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.76□□□□□ -0.05
XPAP23025 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.76□□□□□ -0.05
XPAP23025 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.76□□□□□ -0.05
XPAP23025 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.76□□□□□ -0.05
XPAP23025 AC126335.2-201ENST00000623362 4637 ntBASIC14.76□□□□□ -0.05
XPAP23025 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
XPAP23025 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms