Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 REXO1L6P-201ENST00000603433 1515 ntBASIC12.55□□□□□ -0.4
CCL1P22362 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.55□□□□□ -0.4
CCL1P22362 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL1P22362 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 AC005252.3-201ENST00000623855 2258 ntBASIC12.55□□□□□ -0.4
CCL1P22362 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL1P22362 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL1P22362 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CCL1P22362 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL1P22362 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL1P22362 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
CCL1P22362 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL1P22362 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 MIR326-201ENST00000362220 95 ntBASIC12.54□□□□□ -0.4
CCL1P22362 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL1P22362 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
CCL1P22362 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL1P22362 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL1P22362 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL1P22362 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
CCL1P22362 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL1P22362 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL1P22362 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CCL1P22362 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL1P22362 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL1P22362 AL355385.1-201ENST00000606123 409 ntBASIC12.54□□□□□ -0.4
CCL1P22362 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CCL1P22362 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CCL1P22362 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CCL1P22362 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CCL1P22362 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL1P22362 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL1P22362 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL1P22362 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CCL1P22362 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 TMBIM7P-202ENST00000641474 1516 ntBASIC12.53□□□□□ -0.4
CCL1P22362 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL1P22362 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.53□□□□□ -0.4
CCL1P22362 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.53□□□□□ -0.4
CCL1P22362 AL645933.1-201ENST00000440087 609 ntBASIC12.53□□□□□ -0.4
CCL1P22362 TTTY23B-201ENST00000442790 549 ntBASIC12.53□□□□□ -0.4
CCL1P22362 AC007551.1-201ENST00000457394 519 ntBASIC12.53□□□□□ -0.4
CCL1P22362 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.53□□□□□ -0.4
CCL1P22362 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL1P22362 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms