Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.48□□□□□ -0.09
CAPN1P07384 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN1P07384 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
CAPN1P07384 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.48□□□□□ -0.09
CAPN1P07384 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CAPN1P07384 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CAPN1P07384 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN1P07384 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 AC092135.3-201ENST00000624151 1846 ntBASIC14.48□□□□□ -0.09
CAPN1P07384 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.47□□□□□ -0.09
CAPN1P07384 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CAPN1P07384 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CAPN1P07384 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.47□□□□□ -0.09
CAPN1P07384 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.47□□□□□ -0.09
CAPN1P07384 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.47□□□□□ -0.09
CAPN1P07384 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 AC007969.1-201ENST00000433675 447 ntBASIC14.47□□□□□ -0.09
CAPN1P07384 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.47□□□□□ -0.09
CAPN1P07384 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.47□□□□□ -0.09
CAPN1P07384 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.47□□□□□ -0.09
CAPN1P07384 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.47□□□□□ -0.09
CAPN1P07384 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CAPN1P07384 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN1P07384 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.46□□□□□ -0.09
CAPN1P07384 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CAPN1P07384 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
CAPN1P07384 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CAPN1P07384 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CAPN1P07384 AC003102.2-201ENST00000589195 1469 ntBASIC14.46□□□□□ -0.09
CAPN1P07384 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CAPN1P07384 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.46□□□□□ -0.09
CAPN1P07384 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.46□□□□□ -0.09
CAPN1P07384 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN1P07384 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CAPN1P07384 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.46□□□□□ -0.09
CAPN1P07384 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms