Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CD3DP04234 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CD3DP04234 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.44□□□□□ -0.42
CD3DP04234 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 LINC02486-201ENST00000604157 3000 ntBASIC12.43□□□□□ -0.42
CD3DP04234 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CD3DP04234 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CD3DP04234 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.43□□□□□ -0.42
CD3DP04234 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CD3DP04234 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.43□□□□□ -0.42
CD3DP04234 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 NUS1P3-201ENST00000423502 862 ntBASIC12.43□□□□□ -0.42
CD3DP04234 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.43□□□□□ -0.42
CD3DP04234 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.43□□□□□ -0.42
CD3DP04234 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.43□□□□□ -0.42
CD3DP04234 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.43□□□□□ -0.42
CD3DP04234 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.43□□□□□ -0.42
CD3DP04234 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.43□□□□□ -0.42
CD3DP04234 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.43□□□□□ -0.42
CD3DP04234 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CD3DP04234 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.43□□□□□ -0.42
CD3DP04234 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.43□□□□□ -0.42
CD3DP04234 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.43□□□□□ -0.42
CD3DP04234 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.43□□□□□ -0.42
CD3DP04234 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD3DP04234 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CD3DP04234 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 PCDHA6-201ENST00000378126 3267 ntBASIC12.42□□□□□ -0.42
CD3DP04234 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CD3DP04234 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CD3DP04234 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CD3DP04234 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.42□□□□□ -0.42
CD3DP04234 AC005014.1-201ENST00000432006 2976 ntBASIC12.42□□□□□ -0.42
CD3DP04234 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 HLA-V-204ENST00000476601 1289 ntBASIC12.42□□□□□ -0.42
CD3DP04234 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.42□□□□□ -0.42
CD3DP04234 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.42□□□□□ -0.42
CD3DP04234 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms