Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 TUBB4AP1-201ENST00000450755 1325 ntBASIC8.73□□□□□ -1.01
APOBP04114 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 RHOC-205ENST00000369636 786 ntTSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 AL359092.2-201ENST00000423330 585 ntBASIC8.73□□□□□ -1.01
APOBP04114 RPL10P8-201ENST00000522888 313 ntBASIC8.73□□□□□ -1.01
APOBP04114 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 MIR4326-201ENST00000582203 59 ntBASIC8.73□□□□□ -1.01
APOBP04114 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
APOBP04114 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 AC215219.1-201ENST00000400706 1817 ntBASIC8.73□□□□□ -1.01
APOBP04114 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC8.73□□□□□ -1.01
APOBP04114 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC8.73□□□□□ -1.01
APOBP04114 AP000533.1-201ENST00000456143 1177 ntBASIC8.73□□□□□ -1.01
APOBP04114 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC8.73□□□□□ -1.01
APOBP04114 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC8.73□□□□□ -1.01
APOBP04114 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC8.73□□□□□ -1.01
APOBP04114 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
APOBP04114 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC8.73□□□□□ -1.01
APOBP04114 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 AL354702.1-201ENST00000442006 1960 ntBASIC8.73□□□□□ -1.01
APOBP04114 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 RN7SL672P-201ENST00000474091 317 ntBASIC8.73□□□□□ -1.01
APOBP04114 AC140658.4-201ENST00000561990 352 ntBASIC8.73□□□□□ -1.01
APOBP04114 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC8.73□□□□□ -1.01
APOBP04114 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 AC022001.3-201ENST00000606330 596 ntBASIC8.73□□□□□ -1.01
APOBP04114 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
APOBP04114 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
APOBP04114 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC8.73□□□□□ -1.01
APOBP04114 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 ABCD1P3-201ENST00000562927 605 ntBASIC8.73□□□□□ -1.01
APOBP04114 AC005332.2-201ENST00000590010 930 ntBASIC8.73□□□□□ -1.01
APOBP04114 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 AL121753.2-201ENST00000624581 1461 ntBASIC8.73□□□□□ -1.01
APOBP04114 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
APOBP04114 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC8.73□□□□□ -1.01
APOBP04114 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC8.72□□□□□ -1.01
APOBP04114 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC8.72□□□□□ -1.01
APOBP04114 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC8.72□□□□□ -1.01
APOBP04114 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC8.72□□□□□ -1.01
APOBP04114 AMT-256ENST00000638063 1783 ntTSL 5 BASIC8.72□□□□□ -1.01
APOBP04114 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC8.72□□□□□ -1.01
APOBP04114 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC8.72□□□□□ -1.01
APOBP04114 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC8.72□□□□□ -1.01
APOBP04114 SNX20-205ENST00000610485 557 ntTSL 5 BASIC8.72□□□□□ -1.01
APOBP04114 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
APOBP04114 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC8.72□□□□□ -1.01
APOBP04114 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
APOBP04114 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms