Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SMAD6O43541 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 AC015909.3-201ENST00000572855 1794 ntBASIC14.68□□□□□ -0.06
SMAD6O43541 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SMAD6O43541 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.68□□□□□ -0.06
SMAD6O43541 PDIA3P2-201ENST00000428073 158 ntBASIC14.68□□□□□ -0.06
SMAD6O43541 TSPY25P-201ENST00000429463 745 ntBASIC14.68□□□□□ -0.06
SMAD6O43541 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 AL133466.1-201ENST00000447582 150 ntBASIC14.68□□□□□ -0.06
SMAD6O43541 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 IMP3P2-201ENST00000489760 475 ntBASIC14.68□□□□□ -0.06
SMAD6O43541 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.68□□□□□ -0.06
SMAD6O43541 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 AC245884.6-201ENST00000515672 1067 ntBASIC14.68□□□□□ -0.06
SMAD6O43541 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.68□□□□□ -0.06
SMAD6O43541 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 AC091812.3-201ENST00000621362 345 ntBASIC14.68□□□□□ -0.06
SMAD6O43541 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 AC090505.1-201ENST00000430515 1834 ntBASIC14.68□□□□□ -0.06
SMAD6O43541 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMAD6O43541 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
SMAD6O43541 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.68□□□□□ -0.06
SMAD6O43541 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 AC064801.2-201ENST00000625052 1303 ntBASIC14.67□□□□□ -0.06
SMAD6O43541 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 NFIC-211ENST00000641145 8399 ntBASIC14.67□□□□□ -0.06
SMAD6O43541 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SMAD6O43541 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.67□□□□□ -0.06
SMAD6O43541 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.67□□□□□ -0.06
SMAD6O43541 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.67□□□□□ -0.06
SMAD6O43541 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.67□□□□□ -0.06
SMAD6O43541 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.67□□□□□ -0.06
SMAD6O43541 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.67□□□□□ -0.06
SMAD6O43541 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.67□□□□□ -0.06
SMAD6O43541 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.67□□□□□ -0.06
SMAD6O43541 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.67□□□□□ -0.06
SMAD6O43541 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.67□□□□□ -0.06
SMAD6O43541 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.67□□□□□ -0.06
SMAD6O43541 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.67□□□□□ -0.06
SMAD6O43541 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.67□□□□□ -0.06
SMAD6O43541 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.67□□□□□ -0.06
SMAD6O43541 AC020922.3-201ENST00000595064 547 ntBASIC14.67□□□□□ -0.06
SMAD6O43541 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SMAD6O43541 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 AL136379.1-201ENST00000623471 2642 ntBASIC14.67□□□□□ -0.06
SMAD6O43541 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SMAD6O43541 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SMAD6O43541 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.67□□□□□ -0.06
SMAD6O43541 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 AL161772.1-201ENST00000610494 4412 ntBASIC14.67□□□□□ -0.06
SMAD6O43541 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMAD6O43541 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms