Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN9O14815 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.52■□□□□ 0.07
CAPN9O14815 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.52■□□□□ 0.07
CAPN9O14815 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CAPN9O14815 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.52■□□□□ 0.07
CAPN9O14815 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.52■□□□□ 0.07
CAPN9O14815 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN9O14815 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.52■□□□□ 0.07
CAPN9O14815 AC138969.2-201ENST00000532739 9932 ntBASIC15.52■□□□□ 0.07
CAPN9O14815 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN9O14815 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.52■□□□□ 0.07
CAPN9O14815 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN9O14815 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CAPN9O14815 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CAPN9O14815 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN9O14815 AC006504.5-208ENST00000588784 2401 ntBASIC15.52■□□□□ 0.07
CAPN9O14815 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN9O14815 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN9O14815 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 AL023775.1-201ENST00000454907 1746 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CAPN9O14815 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CAPN9O14815 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN9O14815 PUDPP3-201ENST00000445368 636 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 CHMP1AP1-201ENST00000445563 662 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 HIST2H2BB-201ENST00000449108 381 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.51■□□□□ 0.07
CAPN9O14815 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.51■□□□□ 0.07
CAPN9O14815 ALG3P1-201ENST00000508806 1114 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.51■□□□□ 0.07
CAPN9O14815 AL583810.1-201ENST00000553344 1045 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.51■□□□□ 0.07
CAPN9O14815 RN7SL560P-201ENST00000577943 264 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN9O14815 EEF1DP1-201ENST00000585891 896 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 AL358472.3-201ENST00000608147 415 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 AC244157.2-201ENST00000616239 1006 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 AC107918.4-201ENST00000641966 3141 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN9O14815 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN9O14815 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CAPN9O14815 AC005252.3-201ENST00000623855 2258 ntBASIC15.51■□□□□ 0.07
CAPN9O14815 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CAPN9O14815 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN9O14815 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN9O14815 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN9O14815 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN9O14815 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CAPN9O14815 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN9O14815 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN9O14815 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN9O14815 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CAPN9O14815 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN9O14815 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN9O14815 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN9O14815 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN9O14815 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN9O14815 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CAPN9O14815 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms