Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 AL139008.1-201ENST00000437894 228 ntBASIC13.6□□□□□ -0.23
NTN3O00634 AL135901.1-201ENST00000451812 333 ntBASIC13.6□□□□□ -0.23
NTN3O00634 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NTN3O00634 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.6□□□□□ -0.23
NTN3O00634 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.6□□□□□ -0.23
NTN3O00634 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.6□□□□□ -0.23
NTN3O00634 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NTN3O00634 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.6□□□□□ -0.23
NTN3O00634 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.6□□□□□ -0.23
NTN3O00634 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.6□□□□□ -0.23
NTN3O00634 AL118522.1-201ENST00000611368 560 ntBASIC13.6□□□□□ -0.23
NTN3O00634 AC244250.3-201ENST00000620749 366 ntBASIC13.6□□□□□ -0.23
NTN3O00634 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.6□□□□□ -0.23
NTN3O00634 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NTN3O00634 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NTN3O00634 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NTN3O00634 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NTN3O00634 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NTN3O00634 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NTN3O00634 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.6□□□□□ -0.23
NTN3O00634 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.6□□□□□ -0.23
NTN3O00634 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NTN3O00634 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NTN3O00634 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NTN3O00634 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NTN3O00634 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
NTN3O00634 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.59□□□□□ -0.23
NTN3O00634 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.59□□□□□ -0.23
NTN3O00634 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NTN3O00634 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
NTN3O00634 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.59□□□□□ -0.23
NTN3O00634 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.59□□□□□ -0.23
NTN3O00634 AC019109.1-201ENST00000401725 1874 ntBASIC13.59□□□□□ -0.23
NTN3O00634 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.59□□□□□ -0.23
NTN3O00634 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 KRT8P18-201ENST00000413425 1445 ntBASIC13.59□□□□□ -0.23
NTN3O00634 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.59□□□□□ -0.23
NTN3O00634 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.59□□□□□ -0.23
NTN3O00634 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
NTN3O00634 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
NTN3O00634 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.59□□□□□ -0.23
NTN3O00634 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.59□□□□□ -0.23
NTN3O00634 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 AL512310.5-201ENST00000551999 515 ntBASIC13.59□□□□□ -0.23
NTN3O00634 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.59□□□□□ -0.23
NTN3O00634 AC011247.3-201ENST00000603297 438 ntBASIC13.59□□□□□ -0.23
NTN3O00634 AL359091.4-201ENST00000610052 409 ntBASIC13.59□□□□□ -0.23
NTN3O00634 AC091769.1-201ENST00000619576 568 ntBASIC13.59□□□□□ -0.23
NTN3O00634 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NTN3O00634 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.59□□□□□ -0.23
NTN3O00634 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NTN3O00634 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NTN3O00634 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NTN3O00634 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NTN3O00634 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
NTN3O00634 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.58□□□□□ -0.23
NTN3O00634 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.58□□□□□ -0.23
NTN3O00634 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NTN3O00634 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.58□□□□□ -0.24
NTN3O00634 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.58□□□□□ -0.24
NTN3O00634 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.58□□□□□ -0.24
NTN3O00634 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.58□□□□□ -0.24
NTN3O00634 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NTN3O00634 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.58□□□□□ -0.24
NTN3O00634 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.58□□□□□ -0.24
NTN3O00634 AC006529.1-201ENST00000459978 637 ntBASIC13.58□□□□□ -0.24
NTN3O00634 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.58□□□□□ -0.24
NTN3O00634 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NTN3O00634 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.58□□□□□ -0.24
NTN3O00634 AC022447.6-201ENST00000515522 438 ntBASIC13.58□□□□□ -0.24
NTN3O00634 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms