Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 MIR193A-201ENST00000384882 88 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 SDCBP2P1-201ENST00000416115 614 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 RBM14-205ENST00000443702 732 ntTSL 3 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 KRT18P15-201ENST00000458108 1291 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 RN7SL479P-201ENST00000472003 300 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 RNF7-205ENST00000480908 782 ntTSL 4 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 AC103724.2-201ENST00000520355 476 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 AL121994.1-201ENST00000413189 402 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 AC007881.1-201ENST00000437460 187 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 SNORA50D-202ENST00000627561 132 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 CDIPT-AS1-203ENST00000638164 713 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.66■□□□□ 0.42
RGPD3A6NKT7 DLX4-206ENST00000611342 1662 ntBASIC17.66■□□□□ 0.42
RGPD3A6NKT7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 FAM86FP-201ENST00000338711 969 ntBASIC17.65■□□□□ 0.42
RGPD3A6NKT7 AL031577.1-201ENST00000339867 399 ntBASIC17.65■□□□□ 0.42
RGPD3A6NKT7 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC17.65■□□□□ 0.42
RGPD3A6NKT7 AC069421.1-201ENST00000447462 323 ntBASIC17.65■□□□□ 0.42
RGPD3A6NKT7 ALG10-202ENST00000538927 571 ntTSL 5 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 PCTP-206ENST00000573500 919 ntTSL 3 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RGPD3A6NKT7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RGPD3A6NKT7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 RPL3P9-201ENST00000463217 1183 ntBASIC17.64■□□□□ 0.41
RGPD3A6NKT7 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 RPL10P8-201ENST00000522888 313 ntBASIC17.64■□□□□ 0.41
RGPD3A6NKT7 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms