Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 THY1-209ENST00000580275 578 ntTSL 3 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 PTPN20CP-201ENST00000614090 920 ntBASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHANK2Q9UPX8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 ALG1L7P-201ENST00000502317 768 ntBASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 MIR6816-201ENST00000620368 66 ntBASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHANK2Q9UPX8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 AL590824.1-201ENST00000403828 1349 ntBASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
SHANK2Q9UPX8 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 OR2W2P-201ENST00000406313 909 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC004522.1-201ENST00000419978 654 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 CD81-209ENST00000492627 886 ntTSL 3 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 MIR6746-201ENST00000620971 63 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 HYMAI-201ENST00000635591 3347 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 HSPA8P5-201ENST00000456928 2069 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms