Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 MIR602-201ENST00000384960 98 ntBASIC22.02■■□□□ 1.11
RIMBP3Q9UFD9 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RIMBP3Q9UFD9 HNRNPA1P9-201ENST00000450624 950 ntBASIC22.02■■□□□ 1.11
RIMBP3Q9UFD9 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RIMBP3Q9UFD9 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
RIMBP3Q9UFD9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 RPL29P2-202ENST00000498671 657 ntBASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 DNM1P17-201ENST00000512082 426 ntBASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 AL031058.1-201ENST00000561592 888 ntBASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 AC090616.6-203ENST00000579186 1945 ntBASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RIMBP3Q9UFD9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 LDHAL6FP-201ENST00000405916 1082 ntBASIC22■■□□□ 1.11
RIMBP3Q9UFD9 CACYBPP3-201ENST00000406011 625 ntBASIC22■■□□□ 1.11
RIMBP3Q9UFD9 MIR1307-201ENST00000408840 149 ntBASIC22■■□□□ 1.11
RIMBP3Q9UFD9 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 AC006987.4-201ENST00000430032 279 ntBASIC22■■□□□ 1.11
RIMBP3Q9UFD9 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 AC010776.3-201ENST00000617349 424 ntBASIC22■■□□□ 1.11
RIMBP3Q9UFD9 MIR7848-201ENST00000617402 101 ntBASIC22■■□□□ 1.11
RIMBP3Q9UFD9 AC099795.2-201ENST00000639582 440 ntBASIC22■■□□□ 1.11
RIMBP3Q9UFD9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC22■■□□□ 1.11
RIMBP3Q9UFD9 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 EEF1GP3-201ENST00000421044 1288 ntBASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 SNORA47-201ENST00000458862 138 ntBASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 ST3GAL1P1-201ENST00000513810 1014 ntBASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 IGHV1OR16-3-201ENST00000568138 205 ntBASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 KRT8P25-201ENST00000473150 1456 ntBASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 DUT-208ENST00000559540 1441 ntTSL 2 BASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 PCDHA1-201ENST00000378133 2726 ntBASIC21.99■■□□□ 1.11
RIMBP3Q9UFD9 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 AC096677.3-201ENST00000413162 387 ntBASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 AC116347.1-201ENST00000442824 720 ntBASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 SNORA74.2-201ENST00000516496 180 ntBASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms