Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC010141.1-201ENST00000411585 623 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 TLE1P1-201ENST00000422965 589 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 AL133466.1-201ENST00000447582 150 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 MIR3619-201ENST00000579667 83 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 CU633904.3-201ENST00000624042 1029 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 ACE3P-201ENST00000423435 1973 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 LINC00552-201ENST00000625151 2579 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 AL138725.1-201ENST00000407347 1314 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 REXO1L2P-201ENST00000425429 2069 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 RN7SKP230-201ENST00000365642 335 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 Z97180.1-201ENST00000445173 988 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 SPTLC1P5-201ENST00000450718 252 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 UPF3AP2-201ENST00000457924 1132 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 AC022217.1-201ENST00000521069 738 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 AC009955.4-201ENST00000597192 544 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 AC020910.5-201ENST00000623668 1865 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 AC009093.2-202ENST00000620513 2079 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 TUBBP5-203ENST00000508529 1334 ntBASIC14.62□□□□□ -0.07
SPASTQ9UBP0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.62□□□□□ -0.07
SPASTQ9UBP0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 AC004899.1-201ENST00000424687 1714 ntBASIC14.61□□□□□ -0.07
SPASTQ9UBP0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.61□□□□□ -0.07
SPASTQ9UBP0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms