Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 GOLGA2P8-201ENST00000505201 779 ntBASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 AC093300.1-201ENST00000510368 1201 ntBASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 AC132825.4-202ENST00000578792 434 ntBASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 RN7SL556P-201ENST00000582856 298 ntBASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC52A1Q9NWF4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 AL365181.1-201ENST00000564032 1828 ntBASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 AJ011931.1-201ENST00000618749 2492 ntBASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 OR2W2P-201ENST00000406313 909 ntBASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 RPL3P2-204ENST00000413027 1203 ntBASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 KRT18P15-201ENST00000458108 1291 ntBASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 RN7SL128P-201ENST00000467883 305 ntBASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 APOC1-209ENST00000592885 562 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 AC117503.4-201ENST00000623229 1418 ntBASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC52A1Q9NWF4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 FAM21EP-201ENST00000417804 985 ntBASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 AL929302.1-201ENST00000426556 871 ntBASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 AC027139.1-201ENST00000565286 951 ntBASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 AC148477.9-201ENST00000623974 539 ntBASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 AC004554.1-201ENST00000422830 1468 ntBASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC52A1Q9NWF4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SLC52A1Q9NWF4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms