Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 AC005225.4-201ENST00000557330 545 ntBASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 MIR6074-201ENST00000612054 107 ntBASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 AC020910.6-201ENST00000623084 1459 ntBASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 MYADML-201ENST00000474610 2147 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 PCDHA5-203ENST00000614258 4248 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC011840.2-201ENST00000563063 1520 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AL139094.1-201ENST00000405549 1188 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC007969.1-201ENST00000433675 447 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC022616.1-201ENST00000518688 554 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 CR383656.12-201ENST00000549567 513 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC009486.1-201ENST00000569860 813 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC012645.4-201ENST00000610691 1061 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 SALL4P5-201ENST00000419001 1760 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 RN7SL832P-201ENST00000607781 1756 ntBASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIN7CQ9NUP9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms