Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 SAMD11P1-201ENST00000571429 661 ntBASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 AC112176.1-201ENST00000565428 3024 ntBASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C12orf4Q9NQ89 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms