Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDH20Q9HBT6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.86□□□□□ -0.35
CDH20Q9HBT6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 AC079178.1-201ENST00000420915 656 ntBASIC12.86□□□□□ -0.35
CDH20Q9HBT6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 MIR4741-201ENST00000579822 90 ntBASIC12.86□□□□□ -0.35
CDH20Q9HBT6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 AL359183.1-201ENST00000623796 2132 ntBASIC12.86□□□□□ -0.35
CDH20Q9HBT6 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDH20Q9HBT6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 AC005840.4-201ENST00000541242 2494 ntBASIC12.85□□□□□ -0.35
CDH20Q9HBT6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 PUDPP3-201ENST00000445368 636 ntBASIC12.85□□□□□ -0.35
CDH20Q9HBT6 HIST2H2BB-201ENST00000449108 381 ntBASIC12.85□□□□□ -0.35
CDH20Q9HBT6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 ALG3P1-201ENST00000508806 1114 ntBASIC12.85□□□□□ -0.35
CDH20Q9HBT6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 RNA5SP412-201ENST00000516234 123 ntBASIC12.85□□□□□ -0.35
CDH20Q9HBT6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 DUX4L45-201ENST00000566406 1057 ntBASIC12.85□□□□□ -0.35
CDH20Q9HBT6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 EEF1DP1-201ENST00000585891 896 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms