Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 TPT1P11-201ENST00000458482 498 ntBASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 MAPK10-262ENST00000641051 5738 ntBASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHRDL1Q9BU40 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AC055811.4-201ENST00000624039 1754 ntBASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 KRT8P14-201ENST00000414254 1442 ntBASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms