Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.81■□□□□ 0.44
RPGRQ92834 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.81■□□□□ 0.44
RPGRQ92834 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.81■□□□□ 0.44
RPGRQ92834 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 AL022344.2-201ENST00000568976 968 ntBASIC17.81■□□□□ 0.44
RPGRQ92834 AC073592.2-201ENST00000623062 780 ntBASIC17.81■□□□□ 0.44
RPGRQ92834 AL451007.2-201ENST00000632004 563 ntBASIC17.81■□□□□ 0.44
RPGRQ92834 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.81■□□□□ 0.44
RPGRQ92834 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.81■□□□□ 0.44
RPGRQ92834 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 AC007950.2-201ENST00000615045 2347 ntBASIC17.81■□□□□ 0.44
RPGRQ92834 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.81■□□□□ 0.44
RPGRQ92834 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.8■□□□□ 0.44
RPGRQ92834 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 AC091951.1-201ENST00000512854 2465 ntBASIC17.8■□□□□ 0.44
RPGRQ92834 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.8■□□□□ 0.44
RPGRQ92834 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RPGRQ92834 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.8■□□□□ 0.44
RPGRQ92834 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.8■□□□□ 0.44
RPGRQ92834 GCSHP3-201ENST00000431120 391 ntBASIC17.8■□□□□ 0.44
RPGRQ92834 RPL35P9-201ENST00000446059 350 ntBASIC17.8■□□□□ 0.44
RPGRQ92834 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.8■□□□□ 0.44
RPGRQ92834 AL133467.4-201ENST00000602953 725 ntBASIC17.8■□□□□ 0.44
RPGRQ92834 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 AC011471.3-201ENST00000623576 402 ntBASIC17.8■□□□□ 0.44
RPGRQ92834 AC002044.2-201ENST00000624910 970 ntBASIC17.8■□□□□ 0.44
RPGRQ92834 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RPGRQ92834 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RPGRQ92834 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
RPGRQ92834 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RPGRQ92834 PPT1-215ENST00000641471 2368 ntBASIC17.8■□□□□ 0.44
RPGRQ92834 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.8■□□□□ 0.44
RPGRQ92834 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPGRQ92834 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.79■□□□□ 0.44
RPGRQ92834 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RPGRQ92834 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.79■□□□□ 0.44
RPGRQ92834 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 SCARNA12-201ENST00000459155 270 ntBASIC17.79■□□□□ 0.44
RPGRQ92834 RN7SL396P-201ENST00000471086 295 ntBASIC17.79■□□□□ 0.44
RPGRQ92834 RNA5SP406-201ENST00000516106 112 ntBASIC17.79■□□□□ 0.44
RPGRQ92834 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 AL109954.1-202ENST00000564051 2148 ntBASIC17.79■□□□□ 0.44
RPGRQ92834 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.79■□□□□ 0.44
RPGRQ92834 AC011247.3-201ENST00000603297 438 ntBASIC17.79■□□□□ 0.44
RPGRQ92834 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RPGRQ92834 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.79■□□□□ 0.44
RPGRQ92834 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms