Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RNF138Q8WVD3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RNF138Q8WVD3 KRT8P31-201ENST00000504812 1408 ntBASIC13.05□□□□□ -0.32
RNF138Q8WVD3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 BANF1P3-201ENST00000412556 261 ntBASIC13.04□□□□□ -0.32
RNF138Q8WVD3 AL353637.1-201ENST00000451571 732 ntBASIC13.04□□□□□ -0.32
RNF138Q8WVD3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 AC242376.1-201ENST00000559033 726 ntBASIC13.04□□□□□ -0.32
RNF138Q8WVD3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 AL353770.1-201ENST00000614915 403 ntBASIC13.04□□□□□ -0.32
RNF138Q8WVD3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 AC015909.3-201ENST00000572855 1794 ntBASIC13.04□□□□□ -0.32
RNF138Q8WVD3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF138Q8WVD3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 ELK2AP-201ENST00000392510 1007 ntBASIC13.03□□□□□ -0.32
RNF138Q8WVD3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 HMGA1P1-201ENST00000415560 1062 ntBASIC13.03□□□□□ -0.32
RNF138Q8WVD3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 AC012618.1-201ENST00000461223 412 ntBASIC13.03□□□□□ -0.32
RNF138Q8WVD3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 AC020922.3-201ENST00000595064 547 ntBASIC13.03□□□□□ -0.32
RNF138Q8WVD3 MIR6769A-201ENST00000617340 73 ntBASIC13.03□□□□□ -0.32
RNF138Q8WVD3 AC091812.3-201ENST00000621362 345 ntBASIC13.03□□□□□ -0.32
RNF138Q8WVD3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 TSPY26P-202ENST00000565928 3884 ntBASIC13.03□□□□□ -0.32
RNF138Q8WVD3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF138Q8WVD3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms