Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 CIC-204ENST00000572681 8218 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 AC007969.1-201ENST00000433675 447 ntBASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 AC107373.2-201ENST00000607735 490 ntBASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 MAPK10-262ENST00000641051 5738 ntBASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 AL356585.2-201ENST00000625078 2396 ntBASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB3IL1Q8TBN0 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 SALL4P5-201ENST00000419001 1760 ntBASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 AL136172.1-201ENST00000598590 1394 ntBASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 RFPL4AP1-201ENST00000530883 850 ntBASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms