Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 TUBB1P2-201ENST00000422712 1306 ntBASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 TUBB1P1-201ENST00000503144 1300 ntBASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 AL023775.1-201ENST00000454907 1746 ntBASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH19Q8TAB3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 TMBIM7P-202ENST00000641474 1516 ntBASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
PCDH19Q8TAB3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.08■□□□□ 0
PCDH19Q8TAB3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 DUX4L46-201ENST00000566845 751 ntBASIC15.08■□□□□ 0
PCDH19Q8TAB3 AC132192.2-201ENST00000596206 1147 ntBASIC15.08■□□□□ 0
PCDH19Q8TAB3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 AC104506.1-201ENST00000609247 429 ntBASIC15.08■□□□□ 0
PCDH19Q8TAB3 AC009542.2-202ENST00000619004 1067 ntBASIC15.08■□□□□ 0
PCDH19Q8TAB3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms