Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC18■□□□□ 0.47
RC3H1Q5TC82 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC18■□□□□ 0.47
RC3H1Q5TC82 NME6-208ENST00000435684 599 ntTSL 2 BASIC18■□□□□ 0.47
RC3H1Q5TC82 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC18■□□□□ 0.47
RC3H1Q5TC82 RN7SL556P-201ENST00000582856 298 ntBASIC18■□□□□ 0.47
RC3H1Q5TC82 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC18■□□□□ 0.47
RC3H1Q5TC82 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18■□□□□ 0.47
RC3H1Q5TC82 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC18■□□□□ 0.47
RC3H1Q5TC82 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18■□□□□ 0.47
RC3H1Q5TC82 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RC3H1Q5TC82 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18■□□□□ 0.47
RC3H1Q5TC82 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 FAM21EP-201ENST00000417804 985 ntBASIC17.99■□□□□ 0.47
RC3H1Q5TC82 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 NAV1-210ENST00000593583 726 ntBASIC17.99■□□□□ 0.47
RC3H1Q5TC82 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 AL365181.1-201ENST00000564032 1828 ntBASIC17.99■□□□□ 0.47
RC3H1Q5TC82 PPT1-215ENST00000641471 2368 ntBASIC17.99■□□□□ 0.47
RC3H1Q5TC82 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.99■□□□□ 0.47
RC3H1Q5TC82 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 RPL3P5-201ENST00000441645 1232 ntBASIC17.98■□□□□ 0.47
RC3H1Q5TC82 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.98■□□□□ 0.47
RC3H1Q5TC82 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 MME-218ENST00000625667 363 ntTSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 TBC1D27-202ENST00000424239 1573 ntBASIC17.98■□□□□ 0.47
RC3H1Q5TC82 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 AGAP7P-201ENST00000582299 2062 ntBASIC17.98■□□□□ 0.47
RC3H1Q5TC82 AGAP14-201ENST00000624701 2060 ntBASIC17.98■□□□□ 0.47
RC3H1Q5TC82 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.98■□□□□ 0.47
RC3H1Q5TC82 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms