Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB3Q15768 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB3Q15768 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
EFNB3Q15768 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
EFNB3Q15768 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB3Q15768 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB3Q15768 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB3Q15768 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
EFNB3Q15768 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.46□□□□□ -0.41
EFNB3Q15768 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.46□□□□□ -0.41
EFNB3Q15768 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
EFNB3Q15768 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 AC239868.1-201ENST00000369385 493 ntBASIC12.46□□□□□ -0.41
EFNB3Q15768 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.46□□□□□ -0.41
EFNB3Q15768 ISCA2P1-201ENST00000425548 448 ntBASIC12.46□□□□□ -0.41
EFNB3Q15768 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.46□□□□□ -0.41
EFNB3Q15768 RN7SL720P-201ENST00000488178 304 ntBASIC12.46□□□□□ -0.41
EFNB3Q15768 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.46□□□□□ -0.41
EFNB3Q15768 RHOQP1-201ENST00000555758 579 ntBASIC12.46□□□□□ -0.41
EFNB3Q15768 CHMP4BP1-201ENST00000556017 588 ntBASIC12.46□□□□□ -0.41
EFNB3Q15768 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.46□□□□□ -0.41
EFNB3Q15768 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.46□□□□□ -0.41
EFNB3Q15768 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
EFNB3Q15768 AL157813.1-201ENST00000612996 587 ntBASIC12.46□□□□□ -0.41
EFNB3Q15768 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.46□□□□□ -0.41
EFNB3Q15768 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 AC015688.4-201ENST00000580780 1647 ntBASIC12.46□□□□□ -0.41
EFNB3Q15768 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.46□□□□□ -0.41
EFNB3Q15768 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.46□□□□□ -0.41
EFNB3Q15768 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
EFNB3Q15768 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB3Q15768 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.46□□□□□ -0.42
EFNB3Q15768 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
EFNB3Q15768 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
EFNB3Q15768 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.46□□□□□ -0.42
EFNB3Q15768 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
EFNB3Q15768 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
EFNB3Q15768 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
EFNB3Q15768 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
EFNB3Q15768 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.46□□□□□ -0.42
EFNB3Q15768 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
EFNB3Q15768 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.46□□□□□ -0.42
EFNB3Q15768 KRT8P21-201ENST00000430398 1491 ntBASIC12.46□□□□□ -0.42
EFNB3Q15768 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
EFNB3Q15768 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
EFNB3Q15768 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
EFNB3Q15768 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.45□□□□□ -0.42
EFNB3Q15768 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
EFNB3Q15768 KRT18P36-201ENST00000411618 1276 ntBASIC12.45□□□□□ -0.42
EFNB3Q15768 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.45□□□□□ -0.42
EFNB3Q15768 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 AC012618.1-201ENST00000461223 412 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms