Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 LAP3P2-201ENST00000454686 1454 ntBASIC17.06■□□□□ 0.32
CNTNAP1P78357 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 AC132872.4-202ENST00000622924 2756 ntBASIC17.05■□□□□ 0.32
CNTNAP1P78357 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 FUCA1P1-201ENST00000374476 1351 ntBASIC17.05■□□□□ 0.32
CNTNAP1P78357 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 AC073347.1-201ENST00000421633 2643 ntBASIC17.05■□□□□ 0.32
CNTNAP1P78357 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP1P78357 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP1P78357 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 CASP2-203ENST00000392925 616 ntTSL 3 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.04■□□□□ 0.32
CNTNAP1P78357 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 AC067931.2-201ENST00000623655 2003 ntBASIC17.04■□□□□ 0.32
CNTNAP1P78357 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.04■□□□□ 0.32
CNTNAP1P78357 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 AJ011931.1-201ENST00000618749 2492 ntBASIC17.04■□□□□ 0.32
CNTNAP1P78357 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP1P78357 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP1P78357 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms