Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 AL589987.1-201ENST00000453380 819 ntBASIC12.07□□□□□ -0.48
SUPT4H1P63272 GIMAP3P-201ENST00000495150 836 ntBASIC12.07□□□□□ -0.48
SUPT4H1P63272 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 KRT18P8-201ENST00000581937 1246 ntBASIC12.07□□□□□ -0.48
SUPT4H1P63272 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 AC004466.1-201ENST00000599515 1080 ntBASIC12.07□□□□□ -0.48
SUPT4H1P63272 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 PCDHA6-201ENST00000378126 3267 ntBASIC12.07□□□□□ -0.48
SUPT4H1P63272 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.07□□□□□ -0.48
SUPT4H1P63272 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SUPT4H1P63272 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 POM121L14P-201ENST00000406100 1558 ntBASIC12.06□□□□□ -0.48
SUPT4H1P63272 AC009474.1-201ENST00000455096 1565 ntBASIC12.06□□□□□ -0.48
SUPT4H1P63272 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 AL359845.1-201ENST00000458202 1648 ntBASIC12.06□□□□□ -0.48
SUPT4H1P63272 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 AC024075.2-201ENST00000598112 1473 ntBASIC12.06□□□□□ -0.48
SUPT4H1P63272 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SUPT4H1P63272 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.06□□□□□ -0.48
SUPT4H1P63272 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms