Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC091812.2-201ENST00000619081 385 ntBASIC10.38□□□□□ -0.75
CKS1BP61024 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS1BP61024 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS1BP61024 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
CKS1BP61024 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CKS1BP61024 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS1BP61024 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 AC012531.1-201ENST00000562848 2680 ntBASIC10.38□□□□□ -0.75
CKS1BP61024 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
CKS1BP61024 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS1BP61024 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS1BP61024 AC130686.1-201ENST00000622936 2466 ntBASIC10.38□□□□□ -0.75
CKS1BP61024 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 AMT-224ENST00000635808 1610 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 AC136604.1-201ENST00000418535 575 ntBASIC10.37□□□□□ -0.75
CKS1BP61024 FAM58CP-201ENST00000435741 640 ntBASIC10.37□□□□□ -0.75
CKS1BP61024 TPM4P1-201ENST00000436100 807 ntBASIC10.37□□□□□ -0.75
CKS1BP61024 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.37□□□□□ -0.75
CKS1BP61024 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 AC106730.1-201ENST00000566722 1090 ntBASIC10.37□□□□□ -0.75
CKS1BP61024 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 AC026120.1-201ENST00000611536 926 ntBASIC10.37□□□□□ -0.75
CKS1BP61024 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 AC015819.3-201ENST00000624305 2674 ntBASIC10.37□□□□□ -0.75
CKS1BP61024 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
CKS1BP61024 NBN-203ENST00000409330 4523 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
CKS1BP61024 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS1BP61024 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CKS1BP61024 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CKS1BP61024 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CKS1BP61024 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
CKS1BP61024 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CKS1BP61024 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC10.36□□□□□ -0.75
CKS1BP61024 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CKS1BP61024 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CKS1BP61024 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CKS1BP61024 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CKS1BP61024 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms