Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FOXG1P55316 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FOXG1P55316 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FOXG1P55316 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FOXG1P55316 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
FOXG1P55316 AC018629.1-201ENST00000623381 1736 ntBASIC12.79□□□□□ -0.36
FOXG1P55316 SNX18-202ENST00000343017 3140 ntBASIC12.79□□□□□ -0.36
FOXG1P55316 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FOXG1P55316 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
FOXG1P55316 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FOXG1P55316 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FOXG1P55316 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FOXG1P55316 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
FOXG1P55316 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
FOXG1P55316 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
FOXG1P55316 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.78□□□□□ -0.36
FOXG1P55316 CYP46A4P-201ENST00000414953 267 ntBASIC12.78□□□□□ -0.36
FOXG1P55316 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.78□□□□□ -0.36
FOXG1P55316 ST13P19-201ENST00000442505 1124 ntBASIC12.78□□□□□ -0.36
FOXG1P55316 AC005077.2-201ENST00000449786 690 ntBASIC12.78□□□□□ -0.36
FOXG1P55316 SPTLC1P5-201ENST00000450718 252 ntBASIC12.78□□□□□ -0.36
FOXG1P55316 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 AC003686.1-201ENST00000550956 1034 ntBASIC12.78□□□□□ -0.36
FOXG1P55316 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 AC103810.3-201ENST00000583567 96 ntBASIC12.78□□□□□ -0.36
FOXG1P55316 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.78□□□□□ -0.36
FOXG1P55316 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXG1P55316 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
FOXG1P55316 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXG1P55316 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.77□□□□□ -0.36
FOXG1P55316 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
FOXG1P55316 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
FOXG1P55316 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXG1P55316 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
FOXG1P55316 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.77□□□□□ -0.37
FOXG1P55316 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
FOXG1P55316 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 CALR4P-201ENST00000431943 946 ntBASIC12.77□□□□□ -0.37
FOXG1P55316 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 OR2R1P-201ENST00000441404 914 ntBASIC12.77□□□□□ -0.37
FOXG1P55316 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 AC125604.1-201ENST00000496255 707 ntBASIC12.77□□□□□ -0.37
FOXG1P55316 RCC2P8-201ENST00000502779 1035 ntBASIC12.77□□□□□ -0.37
FOXG1P55316 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.37
FOXG1P55316 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
FOXG1P55316 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 RN7SL774P-201ENST00000577467 290 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms